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Aquatic Community Dynamics in Bonneville Reservoir, Columbia River and Tributary Streams

The Problem

Bonneville Reservoir (BR) and its tributary streams are largely contained within the Columbia River Gorge National Scenic Area. Many recreational enthusiasts, including sport fisherman, heavily use the area. Fisheries in these areas provide fishing opportunities for white sturgeon, steelhead, spring chinook, fall chinook, and coho salmon, while recreational fisheries for native and non-native resident game fish
Bonneville Reservoir near Hood River, OR
Bonneville Reservoir near Hood River, OR
occur on most backwaters of the reservoir and in the upper reaches of the tributaries. Tribal commercial fisheries for salmon, steelhead trout, and white sturgeon also occur throughout the year on this reservoir. Despite the popularity and importance of this fishery, little is known of the status and community dynamics of fishes resident in the reservoir or of the factors that contribute to, or limit, the biological productivity of this area. The role of nutrient and thermal inputs on the productivity of the system, the composition and dynamics of the phytoplankton and zooplankton communities, the importance of tributary streams and their interface with mainstem habitats, as thermal refugia for migrant salmonids and resident fish, the importance of tributaries as spawning habitat for non-salmonid fishes, and the use of reservoir habitats by fish typically resident in tributary streams (e.g., Bull trout Salvelinus confluentus) remains unknown.

The fish community in the Columbia River has been affected by a combination of hydropower development, species introductions and invasions, over-harvest, and habitat degradation in tributaries from agricultural practices (e.g., timber harvest, irrigation withdrawals) and urbanization (Li et al. 1987; in Community and Evolutionary Ecology of North American Stream Fishes. University of Oklahoma Press, Norman, Oklahoma, Independent Science Group 2000; An alternative conceptual foundation for the Columbia River Basin Fish and Wildlife Program of the Northwest Power Planning Council). The nature of these disturbances suggests that the trophic-level dynamics of the Columbia River ecosystem and the role of tributaries in determining production of fishes in the mainstem have undergone significant changes. This study will document the aquatic community dynamics in a Columbia River reservoir and its major tributaries.

Our primary focus will be to describe the abundance and distributions of fish, movements of fish, and fishery stability relative to environmental conditions in the river. In addition, we will compile existing information and collect new data to describe the terrestrial and aquatic habitats, land- and water-use activities, and the extent and abundance of aquatic invasive species that could potentially affect the fishery in this area.

Objectives

Our primary objectives for 2003 are to: 1) Compile existing data, collect new information, and derive parameters describing the aquatic and terrestrial habitats found within the study area and then incorporate this information into a GIS, 2) Compile existing information on the composition and abundance of macro-invertebrate populations and the abundance and distributions of fish within BR and its tributaries, 3) Collect information on thermal, nutrient, and discharge inputs into Bonneville Reservoir and work with the Geologic Division to collect information on the substrate composition and channel morphology of BR, and 4) Develop a website to display the information collected during 2001 and in subsequent years.

Information from this project will provide a synthesis of aquatic community dynamics in a spatial framework. Linkage to the tributaries will help managers and researchers in the region better understand how this important reservoir functions and what inputs may regulate production and fish populations. Establishment of a resource assessment program, which is part of the long-term goal, will provide regional managers with appropriate data for measuring change in the reservoir.

Methodology

Bonneville Reservoir substrate characterization

A cooperative effort between the USGS Coastal and Marine Geology Program and the USGS Biologic Resource Division, Columbia River Research Laboratory to map the surficial sediment distribution and sediment thickness within the Bonneville Reservoir was conducted during 2001. The goal of this study is to define benthic habitats and to assess sediment accumulation and its effects to the larger scale sediment budget of the Columbia River and adjacent coastal ocean. The study area encompassed roughly 70 km of the Columbia River from the Bonneville Dam to The Dalles. The USGS Cruise E1-01-CR was conducted within the Bonneville Reservoir, August 3 - 21, 2001.

Side scan sonar image of the Columbia River near Lyle, WA.
Side scan sonar image of the Columbia River near Lyle, WA.

The geophysical data were acquired using a Benthos (Datasonics) SIS-1000 system (comprised of a sidescan-sonar (~100 kHz) and sub-bottom profiler (2 - 7 kHz swept FM (CHIRP), and an Edgetech DF-1000 100/500 kHz dual-frequency sidescan-sonar system. The SIS-1000 was utilized to acquire sub-bottom data only; the sidescan-sonar portion of the system was not operational. These data were logged digitally, processed and mosaic in the field generating a base from which the sample locations were chosen. Grab sample, video, and still photographs were acquired using the SEABOSS system and used to ground-truth the sidescan-sonar data.

Aquatic macrophyte bed mapping, Bonneville Reservoir, 2001-2002

Initial efforts to document the extent of Eurasian watermilfoil (Myriophyllum spicatum) in Bonneville Reservoir were initiated by the USGS Columbia River Research Laboratory during 2001 and continued during 2002. During 2001 and 2002, the USGS surveyed Bonneville Reservoir for aquatic macrophytes, including Eurasian watermilfoil. Aquatic macrophyte beds were sampled using a modified-rake sampler to collect specimens at each macrophyte bed. Species were identified to family. Percent composition of each species was estimated. Using a boat, the USGS collected samples and surveyed the Oregon and Washington shoreline from Bonneville Dam's forebay boat restricted zone (BRZ) at river kilometer (rkm) 235.1 to The Dalles Dam tailrace BRZ at rkm 307.8. Locations and boundaries of macrophyte beds were recorded using a global positioning system, and downloaded to Arcview
Eurasian watermilfoil in Bonneville Reservoir.
Eurasian watermilfoil in Bonneville Reservoir.
geographic information system software. Using locations of aquatic macrophyte bed boundaries and the shoreline, the USGS has created polygons representing each macrophyte bed. The goal of this project is to develop a model that will predict the probability of Eurasian watermilfoil occurrence by combining information on the location and extent of Eurasian watermilfoil with substrate composition, water depth, water velocity, and other pertinent data. The model will provide a means to identify factors promoting the establishment of this invasive aquatic plant.


Highlights and Key Findings

Existing information has been compiled for all major tributaries to the reservoir. Side-scan sonar and sub-bottom profiling data has been collected and is being processed by the Geologic Discipline. Preliminary results indicate that less fine sediment than expected is present in the reservoir but is greater than for other reservoirs where similar data have been collected. Surveys of shallow water habitat indicate that almost all of these habitat types are either occupied by the invasive aquatic plant, Eurasian watermilfoil or consist of rip-rap for railroad grades. Consequently, little pristine shoreline areas exist.

Where Are We Headed In 2003

During 2003 data collection efforts will continue for this project. Objectives to be addressed include:

  • Collect bathymetry data for Bonneville Reservoir with the Geologic Discipline's assistance.
  • Complete side-scan sonar survey of the reservoir (e.g., some shallow water areas were not surveyed during the 2001 cruise).
  • Develop a two dimensional hydraulic model for Bonneville Reservoir.
  • Explore alternate techniques for mapping aquatic macrophytes in Bonneville Reservoir.
  • Complete the analysis of the aquatic macrophyte data collected during 2001 and 2002 including information regarding the species composition and density of the beds and include these in a GIS.
  • Use existing water temperature data to calibrate remote sensing data.
  • Compile additional information for Bonneville Reservoir (e.g., species distributions from white sturgeon trawling data) and include information in GIS.
  • Summarize water temperature collected to date.

Project Contact

Tim Counihan
U.S. Geological Survey
Western Fisheries Research Center
Columbia River Research Laboratory
5501-A Cook-Underwood Rd.
Cook, WA 98605-9717

Email: tim_counihan@usgs.gov
Phone: 509-538-2299
Fax: 509-538-2843

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